I'm going to call BS on the 'custom' tune, based on the following observations. Most of the PnP ECUs available from the likes of Blitz, Sard, HKS etc. were just tuned ROMS with more aggressive IGN timing and slightly better fuel maps, no speed/fuel cuts and a higher RPM limiter (around 8000rpm IIRC) and were intended for use on stock (or mostly stock) engines. The common factor between them all was the requirement of premium grade fuel (like the 102? Octane available from the Japanese pumps).
Back in the early 90's, custom tunes for the end-user would have been left to the likes of the Piggy-back Fuel computers like the HKS FC and suchlike.
Many people ran into issues with them when they changed things like the turbocharger, boost pressure, timing (distributor), fuel system or electrics. I've seen several cars with PnP ECUs from the 90s start detonating and reverting them to standard issue ECUs fixed all the problems.