If you're in NSW, there might be a few BEAMS lying around ask Ichiban Imports or SSS Automotive but don't get a bare engine otherwise it's just a headache.
There's a theory that Japanese fuel is of better quality so JDM motors run at a higher compression or have no EGR system which bumps up the power a bit. You won't have much luck "tuning" the ECU with a dyno or whatever.
Saying that there is a way you might be able to increase power with NA, by modifying the intake system. A guy named Wiz has done this with dyno results and got 4rwkw and 14 Nm of torque!!! I was in the middle of this but never finished it as my engine blew lol (well in about 2000km)
I recently read a post up on MR2.com and there's a guy named mr220v who said that the gear ratios are slightly different on the Gen 2 and Gen 3 motors. This might explain why Gen 2s are equal or faster than Gen 3 despite less power. Gen 3 apparently might have a more relaxed gear ratio.
In the end it's all about time and money again so easiest and least headache method would be what you're doing I suppose.
P.S There's a guy called "
Whore of Babylon" that is selling a Gen 2 reconditioned head with some work done which might be a good semi-upgrade for
power. Maybe ask him about it?